Bulk RNAseq - Bioinformatics Resource Center Learning Series 2024/2025

The Bioinformatics Resource Center invites you to the following event as a part of our bioinformatics learning series.
 
Topic:     Bulk RNAseq
Date:      05/06/25 & 05/07/25
Time:      9:30am-4:30 pm,
Location: Weiss 305

Bulk RNAseq remains the most straightforward and cost-effective method to assay gene expression in a population of cells. It is also a great entry point for bioinformatics analysis as a many of the core concepts extend to more complex genomic analysis i.e. scRNAseq and ATACseq.

By the end of these sessions participants will be able perform a complete bulk RNAseq workflow including QC, mapping, differential analysis, and gene set analysis. We will also cover more advanced topics such as what to do with batch issues or how to find differential transcript usage.
These are in-person training sessions. Sessions will be a mixture of presentations and live coding. Participants are encouraged to code along with the instructor. 

 
We will limit the number of registrants and there will be a charge of $200 per participant.

FAQs


Is this a credited course for Graduate Students?
No. There is a Graduate School course which overlaps with the material covered in this session. Reach out to the Graduate School if you are interested.
 
I have registered. What now?
After registration, you will receive a confirmation email. We will follow up closer to the course date with additional details about the room and how to set up your computer before these sessions.
 
I have no programming experience. Is this appropriate for me? 
No. Though we will help you get set up, we will be working on plotting and not the basics of R. You could review our Intro to R course material beforehand. 
 
When will you cover other topics?
We have many other sessions currently planned. Check our website for a full list of our courses.

Research Assistant     
Postdoc     
Graduate Student     
Staff Scientist     
Head of Laboratory     
Administrator     
Other     

Never done programming     
Have attended classes, but never used it solo     
Have done some basics i.e. reading/writing tables     
Worked through some analysis workflows     
Build and maintain your own analysis workflows     

R     
Python     
Command Line Tools     
Matlab     
Perl     
Java     
C++     
Other     

General data handling and plotting     
scRNAseq     
Bulk RNAseq     
ChIPseq     
ATACseq     
Image analysis     
Other     

Select Session

BULK RNASEQ
Availability -  Open

Session 1

Date - Tuesday May 06, 2025
Time: 9:30 am - 4:30 pm
Location: 305 WRB
Instructor - Thomas Carroll, Jenelys Ruiz-Ortiz and Matt Paul
Contact - Matt Paul
brc@rockefeller.edu

Availability -  Open

Session 2

Date - Wednesday May 07, 2025
Time: 9:30 am - 4:30 pm
Location: 305 WRB
Instructor - Thomas Carroll, Jenelys Ruiz-Ortiz and Matt Paul
Contact - Matt Paul
brc@rockefeller.edu